ABOUT THIS RECORDspecies: Oryza sativa
source: microPC, original name: miR816
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTGACATATTCTAGTACAAC miRNA* AATACTAAGATATGTCAC mismatches: 4 bulges: 0 |
pre-miRNA
GTGACATATTCTAGTACAACGAATCTGGACAGGTGTATATCCAGATTTGTAATACTAAGATATGTCAC
dot-bracket secondary structure
(((((((((..(((((..(((((((((((.(......).)))))))))))..)))))..)))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
GTGACATATTCTAGTACAACGAATCTGGACAGGTGTATATCCAGATTTGTAATACTAAGATATGTCAC
dot-bracket secondary structure
(((((((((..(((((..(((((((((((.(......).)))))))))))..)))))..)))))))))
SIMILARITIES| miRBase osa-MIR814c: 0.00001 PMRD osa-miRf11780-akr: 0.00001 microPC miR816: 0.0000002 | UniProt no hits RFAM MIR1122: 0.0000000000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
