ABOUT THIS RECORDspecies: Glycine max
source: microPC, original name: miR156
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGAGAGTGAGCAC miRNA* GCTCACTTCTCTATCTG mismatches: 0 bulges: 2 |
pre-miRNA
CAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTG
dot-bracket secondary structure
(((((((((((((((((..(((....(((.(((((((....))))))).))).)))..)))))))).))))).))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTG
dot-bracket secondary structure
(((((((((((((((((..(((....(((.(((((((....))))))).))).)))..)))))))).))))).))))
SIMILARITIES| miRBase gma-MIR156a: 2e-38 PMRD gma-miR156a: 2e-38 microPC miR156: 2e-38 | UniProt no hits RFAM mir-156: 0.000000001 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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