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ABOUT THIS RECORD
ID:
MNEST046679
species:
Hordeum vulgare
source:
microPC, original name:
miR1439
Taxonomy by NCBI:
Hordeum vulgare
Hordeum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTA
miRNA*
CTCCCTCCGTCTCAAAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
TA
CTCCCTCCGTCTCAAAATA
ACTGTCTCAACTTTGTACTAGCTCTAGTATAAAATTGTACTAAGCTTGAGACACTTA
TTTTGGAACGGAGGGAGTA
dot-bracket secondary structure
((
((((((((((..(((((((
(.(((((((..........((((.(((((((....)))))))))))))))))).)))
)))))..))))))))))))
SIMILARITIES
miRBase
far-MIR1122
:
0.000005
PMRD
hpr-miR1120
:
0.0000003
microPC
miR1439
:
2e-26
UniProt
no hits
RFAM
MIR1122: 5e-37
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
degradome data
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