ABOUT THIS RECORDspecies: Oryza sativa
source: microPC, original name: miR414
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCATCTTCATCTTCATCGTCA miRNA* CAAGGGAAGGTGAGGAGGA mismatches: 3 bulges: 2 |
pre-miRNA
TCATCTTCATCTTCATCGTCATCGTCGATGCCGAGAACTACATTTCCATGCAAGATGATGCAAGGGAAGGTGAGGAGGA
dot-bracket secondary structure
((.(((((((((((.((..(((((((..(((.((((......))))...))).)))))))...))))))))))))).))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCATCTTCATCTTCATCGTCATCGTCGATGCCGAGAACTACATTTCCATGCAAGATGATGCAAGGGAAGGTGAGGAGGA
dot-bracket secondary structure
((.(((((((((((.((..(((((((..(((.((((......))))...))).)))))))...))))))))))))).))
SIMILARITIES| miRBase ath-MIR414: 0.0009 PMRD ath-miR414: 0.0009 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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