miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST046700
species: Ocimum basilicum
miRNA family: MIR160
source: microPC, original name: miR160

Taxonomy by NCBI:
Ocimum basilicum Ocimum Ocimeae Nepetoideae Lamiaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGCCTGGCTCCTTGTATGCCA

miRNA*
GCATGCTCGGAGCCATGCA

mismatches: 4
bulges: 0

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pre-miRNA
TGCCTGGCTCCTTGTATGCCATTCGTGGAGTCTATCCATACGCGGCCAGCCTTCGTGGATGGCATGCTCGGAGCCATGCA

dot-bracket secondary structure
.((.(((((((..(((((((((((((((((.((..((......))..)).)))))))))))))))))..))))))).)).

UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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