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ABOUT THIS RECORD

ID: MNEST046704
species: Oryza sativa
source: microPC, original name: miR530

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCATTTGCACCTGCACCT

miRNA*
 GTGCCAAGGCAGATGCA

mismatches: 5
bulges: 0
View larger
pre-miRNA
 TGCATTTGCACCTGCACCTACAGAGAGGGAGATGGAGCAGCAAGCTAGCAATACGTGCTTGATCGCTATACGCTAGCTTCTTGCACCCATGTTGGTCCCT
GGCCCCTTCCTGATCCCTAGGTGCCAAGGCAGATGCA

dot-bracket secondary structure
.((((((((....(((((((..((.((((((..((.((((.((((((((.(((.(((......))))))..)))))))).)))).))......(((....
.))).))))))..))..)))))))....)))))))).


SIMILARITIES
miRBase osa-MIR530: 7e-46

PMRD osa-miRf10677-akr: 7e-46

microPC miR530: 6e-74		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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