ABOUT THIS RECORDspecies: Euphorbia esula
miRNA family: MIR157
source: microPC, original name: miR157
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGATAGAGAGCAC miRNA* GCTCTCTATGCTTCTGTCA mismatches: 1 bulges: 1 |
pre-miRNA
TGACAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAATTCACTCCTTTGTGCTCTCTATGCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((((.(((((.((((..((((....)))))))).))).)).)))))))))))))).)))))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGATAGAGAGCACAGATGATGATTTTGGAGTTGAAATTAATCAAATTCACTCCTTTGTGCTCTCTATGCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((((.(((((.((((..((((....)))))))).))).)).)))))))))))))).)))))))).
SIMILARITIES| miRBase aqc-MIR156b: 0.00000000007 PMRD mtr-miR156e: 0.00000000007 microPC miR157: 2e-42 | UniProt no hits RFAM no hits |
Identical with: miR156 from microPC (MNEST046591) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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