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ABOUT THIS RECORD

ID: MNEST046719
species: Saccharum officinarum
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTTCTCTCTCTGTCA

mismatches: 1
bulges: 2
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pre-miRNA
 TGACAGAAGAGAGTGAGCACACATGGTGCCTTTCTTGCATGATGAACGATCGAGAGGTTCATGCTCGAAGCTATGCGTGCTCACTTCTCTCTCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((.((((((....(((..((((((......(((....)))))))))..))))))))).)))))))).))))).)))))).


SIMILARITIES
miRBase ssp-MIR156: 8e-51

PMRD zma-miR156o: 7e-42

microPC miR156: 8e-51		UniProt no hits

RFAM mir-156: 2e-21

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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