ABOUT THIS RECORDspecies: Malus domestica
miRNA family: MIR398
source: microPC, original name: miR398
SEQUENCE & STRUCTURE| miRNA TGTGTTCTCAGGTCGCCCCTG miRNA* GGAGTGACCTGAGATCACATG mismatches: 2 bulges: 0 |
pre-miRNA
CAGGAGTGACCTGAGATCACATGTAGCATTTATGTATTGCACTTGATGTGTTCTCAGGTCGCCCCTG
dot-bracket secondary structure
((((.(((((((((((.(((((((.(((.........)))))...))))).))))))))))).))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGGAGTGACCTGAGATCACATGTAGCATTTATGTATTGCACTTGATGTGTTCTCAGGTCGCCCCTG
dot-bracket secondary structure
((((.(((((((((((.(((((((.(((.........)))))...))))).))))))))))).))))
SIMILARITIES| miRBase tcc-MIR398a: 0.0000002 PMRD ptc-miR398b: 0.000003 microPC miR398: 2e-32 | UniProt no hits RFAM MIR398: 0.00005 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
