ABOUT THIS RECORDspecies: Selaginella moellendorffii
miRNA family: MIR536
source: microPC, original name: miR536
SEQUENCE & STRUCTURE| miRNA TCGTGTCAAGCTGTGTGCATC miRNA* TGCACTCAGCTTGACACGGCC mismatches: 1 bulges: 0 |
pre-miRNA
GATGCACTCAGCTTGACACGGCCGTGCTTGGAAGTCTGGAAAGTTTTCTTTCACGCTCCACTGATGCTGCTGCTGCAATGCGTGCTCTCTCTCTTGGTCG
TGTCAAGCTGTGTGCATC
dot-bracket secondary structure
(((((((.((((((((((((((((....((((.((...(((((....)))))..))))))...(((((((....)))..))))...........))))))
)))))))))).)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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deep sequencing data evidence
GATGCACTCAGCTTGACACGGCCGTGCTTGGAAGTCTGGAAAGTTTTCTTTCACGCTCCACTGATGCTGCTGCTGCAATGCGTGCTCTCTCTCTTGGTCG
TGTCAAGCTGTGTGCATC
dot-bracket secondary structure
(((((((.((((((((((((((((....((((.((...(((((....)))))..))))))...(((((((....)))..))))...........))))))
)))))))))).)))))))
SIMILARITIES| miRBase smo-MIR536: 1e-47 PMRD smo-miR536: 1e-47 microPC miR536: 1e-62 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
deep sequencing data evidence
