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ABOUT THIS RECORD
ID:
MNEST046745
species:
Populus trichocarpa
miRNA family:
MIR1448
source:
microPC, original name:
miR1448
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTTTCCAACGCCTCCCATAC
miRNA*
ATGGGAGGATTGGACAGGC
mismatches:
2
bulges:
1
View larger
pre-miRNA
GT
ATGGGAGGATTGGACAGGC
CTGCTTGGCTTTAATTAACCAAAGTCTGTT
CTTTCCAACGCCTCCCATAC
dot-bracket secondary structure
((
((((((((.(((((.((..
(.....((((((........)))))).)..
)).)))))..))))))))))
SIMILARITIES
miRBase
ptc-MIR1448
:
1e-27
PMRD
ptc-miR1448
:
1e-27
microPC
miR1448
:
1e-27
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
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