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ABOUT THIS RECORD
ID:
MNEST046800
species:
Oryza sativa
source:
microPC, original name:
miR1030
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTGCATTTGCACCTGCACC
miRNA*
TGCAGAGGCAGATGCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
CTGCATTTGCACCTGCACC
TACAGAGAGGAAGATGGAGCAGCAAGCTAGCAATACGTGCTTGATCGCTATACGCTAGCTTCTTGCACACAATGTTGTTCC
TGGTCCCTTCCTGATCCCTAGG
TGCAGAGGCAGATGCA
dot-bracket secondary structure
..((((((((..(((((((
((..((.((((((..(((((((((.(....).....((((..((..((((.....)))).))..))))....)))))))))
......))))))..))..))))
)))))..)))))))).
SIMILARITIES
miRBase
osa-MIR530
:
1e-69
PMRD
osa-miRf10677-akr
:
1e-69
microPC
miR530
:
2e-74
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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