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ABOUT THIS RECORD
ID:
MNEST046830
species:
Fragaria vesca
miRNA family:
MIR157
source:
microPC, original name:
miR157
Taxonomy by NCBI:
Fragaria vesca
Fragaria
Potentilleae
Rosodae
Rosoideae
Rosaceae
Rosales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGATAGAGAGCAC
miRNA*
GCTCTCTATGCTTCTGTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TTGACAGAAGATAGAGAGCAC
AGATGGATGACTTGCAATGAATATGCATCTCACTCCTTTGT
GCTCTCTATGCTTCTGTCA
dot-bracket secondary structure
.((((((((((((((((((((
(((.((((((..((((.......))))..))).))))))))
))))))))).)))))))))
SIMILARITIES
miRBase
ptc-MIR156j
:
7e-20
PMRD
ptc-miRf10223-akr
:
7e-20
microPC
miR157
:
4e-40
UniProt
no hits
RFAM
no hits
Identical with:
miR156
from microPC (
MNEST046687
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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