miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST046849
species: Allium cepa
miRNA family: MIR171
source: PMRD, original name: ace-miR170c

Taxonomy by NCBI:
Allium cepa Allium Allieae Allioideae Amaryllidaceae Asparagales Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGCGCCAATATC

miRNA*
 GGGTTGCCAGCTTCTAGAA

mismatches: 8
bulges: 5
View larger
pre-miRNA
 TGATTGAGCCGCGCCAATATCTCACGCGCAGTGAAAGGGTTGCCAGCTTCTAGAA

dot-bracket secondary structure
.....((((.(((((....(.((((.....)))).).)).)))..))))......


SIMILARITIES
miRBase bdi-MIR171a: 0.0000001

PMRD ace-miR171a: 0.00000004

microPC miR171: 0.0001		UniProt no hits

RFAM MIR171_1: 0.00001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record




Liczniki na strone;