ABOUT THIS RECORDspecies: Antirrhinum majus
source: PMRD, original name: ama-miR169
Taxonomy by NCBI:
Antirrhinum majus Antirrhinum Antirrhineae Plantaginaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAAGGATGACTTGCCGA miRNA* GGCAAGTTATCTTTGGCTAC mismatches: 0 bulges: 0 |
pre-miRNA
AAGGTTACGAGGTATAGCCAAGGATGACTTGCCGACGAAAGTAAGTACATTCATGTATTTTGTAAGGTCGGCAAGTTATCTTTGGCTACATCTCTACCTAA
dot-bracket secondary structure
)((((...(((((.((((((((((((((((((((((......(((((((....)))))))......)))))))))))))))))))))).))))).))))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AAGGTTACGAGGTATAGCCAAGGATGACTTGCCGACGAAAGTAAGTACATTCATGTATTTTGTAAGGTCGGCAAGTTATCTTTGGCTACATCTCTACCTAA
dot-bracket secondary structure
)((((...(((((.((((((((((((((((((((((......(((((((....)))))))......)))))))))))))))))))))).))))).))))..
SIMILARITIES| miRBase ptc-MIR169c: 5.0E-6 PMRD ptr-miR169a: 5.0E-6 microPC miR169: 5.0E-6 | UniProt no hits RFAM 2MIR169_2: 9.0E-51 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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