ABOUT THIS RECORDspecies: Aquilegia coerulea
miRNA family: MIR477
source: PMRD, original name: aqc-miR477b
SEQUENCE & STRUCTURE| miRNA CTCTCCCTCAAGGGCTTCTA miRNA* GAAGCACTTGCAGGGGAGTA mismatches: 1 bulges: 2 |
pre-miRNA
ACTCTCCCTCAAGGGCTTCTAACAGTCATTTAGAAAATGCAGATGTAATTAGAAGCACTTGCAGGGGAGTAT
dot-bracket secondary structure
((((.((((((((.((((((((....(((((.(......))))))...)))))))).)))).))))))))..
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Puzey JR, Kramer EM, Gene. 448:46-56(2009)., "Identification of conserved Aquilegia coerulea microRNAs and their targets"
ACTCTCCCTCAAGGGCTTCTAACAGTCATTTAGAAAATGCAGATGTAATTAGAAGCACTTGCAGGGGAGTAT
dot-bracket secondary structure
((((.((((((((.((((((((....(((((.(......))))))...)))))))).)))).))))))))..
SIMILARITIES| miRBase aqc-MIR477b: 2e-35 PMRD aqc-miR477g: 0.0000002 microPC no hits | UniProt no hits RFAM MIR473: 0.0009 |
Identical with: aqc-MIR477b from miRBase (MNEST041195) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Puzey JR, Kramer EM, Gene. 448:46-56(2009)., "Identification of conserved Aquilegia coerulea microRNAs and their targets"
