ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10049-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGCGAGGGAAGGCTTCCTCG miRNA* AGGGAAGGCATTCCTCGCAGTTT mismatches: 3 bulges: 1 |
pre-miRNA
TGCGAGGGAAGGCATTCCTCGCAGTTTTTGCGAGGGTATTGCGAGTAACGTGCTACACATCGGACGCGCGTAGCAATTCCGTCGCAAAACTTGCGAGGGA
AGGCTTCCTCGCA
dot-bracket secondary structure
.((((((.(((.(.((((((((((.((((((((.((.(((((.....((((((............)))))).))))).)).)))))))).))))))))))
.).))))))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
TGCGAGGGAAGGCATTCCTCGCAGTTTTTGCGAGGGTATTGCGAGTAACGTGCTACACATCGGACGCGCGTAGCAATTCCGTCGCAAAACTTGCGAGGGA
AGGCTTCCTCGCA
dot-bracket secondary structure
.((((((.(((.(.((((((((((.((((((((.((.(((((.....((((((............)))))).))))).)).)))))))).))))))))))
.).))))))))).
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
