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ABOUT THIS RECORD
ID:
MNEST047150
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10050-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATCTTGGCCTTGTCATCTCA
miRNA*
AAATGACAAGGCCAAGATAC
mismatches:
1
bulges:
0
View larger
pre-miRNA
GATCAACGGTTG
AAATGACAAGGCCAAGATAC
GGCAAGAAAATATTATTCTAAAAGATAAATGTTAAACTTTCTAAACTTCAATATTAACATTTATCTTC
TAGAATAATATCTTTTTGTTAT
ATCTTGGCCTTGTCATCTCA
ACCGTCGATC
dot-bracket secondary structure
((((.(((((((
(.(((((((((((((((((.
.(((((((.(((((((((((.((((((((((((((..................)))))))))))))).
))))))))))).)))))))..)
)))))))))))))))).)))
))))).))))
SIMILARITIES
miRBase
ath-MIR5024
:
8e-83
PMRD
ath-miRf10977-akr
:
8e-83
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10977-akr
from PMRD (
MNEST048077
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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