ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10055-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGGTTACCCATATGGCCATCTC miRNA* GATGGCTGTTTGGGTAACTAAT mismatches: 2 bulges: 0 |
pre-miRNA
GATTCATTTCAGATGGCTGTTTGGGTAACTAATATTTAAGATTTTGGTCAATTTAAGTTACCAATTTATATATTGGTTACCCATATGGCCATCTCAAATT
TAATC
dot-bracket secondary structure
((((.((((.((((((((((.((((((((((((((.((((...(((((.(((....)))))))))))).)))))))))))))).)))))))))).)))).
.))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GATTCATTTCAGATGGCTGTTTGGGTAACTAATATTTAAGATTTTGGTCAATTTAAGTTACCAATTTATATATTGGTTACCCATATGGCCATCTCAAATT
TAATC
dot-bracket secondary structure
((((.((((.((((((((((.((((((((((((((.((((...(((((.(((....)))))))))))).)))))))))))))).)))))))))).)))).
.))))
SIMILARITIES| miRBase ath-MIR774: 9e-51 PMRD ath-miR774: 9e-51 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miR774 from PMRD (MNEST047047) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
