ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10094-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGGTCGAGTGTCTTCTACT miRNA* GTGAAGATACTCGACCTCGG mismatches: 2 bulges: 0 |
pre-miRNA
TCTGGTAATGGAGGTGAAGATACTCGACCTCGGGGTCGAGTGATGTGATCGAGTGATGGTCAGGTGATGGGAATGAAGACACTCGACCGCGAGGTCGAGT
GTCTTCTACTCGACCAGG
dot-bracket secondary structure
.(((((....(((..(((((((((((((((((.(((((((((((.((((((.....)))))).))..............))))))))).)))))))))))
))))))..))).))))).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
download this record
TCTGGTAATGGAGGTGAAGATACTCGACCTCGGGGTCGAGTGATGTGATCGAGTGATGGTCAGGTGATGGGAATGAAGACACTCGACCGCGAGGTCGAGT
GTCTTCTACTCGACCAGG
dot-bracket secondary structure
.(((((....(((..(((((((((((((((((.(((((((((((.((((((.....)))))).))..............))))))))).)))))))))))
))))))..))).))))).
SIMILARITIES| miRBase no hits PMRD ath-miRf10095-akr: 1e-62 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10095-akr from PMRD (MNEST047195) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
download this record
