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ABOUT THIS RECORD
ID:
MNEST047198
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10098-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGTGTCGATCGACACCCAAGT
miRNA*
CAGGGTGTCGATCGACACCAGT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GATCGATACAC
CAGGGTGTCGATCGACACCAGT
TACTCTTGACGCCTCTGTTTTTCCTTTGTCGAGTGGAATTGACAATTTTGCGGAGGAGGAGGAAACT
ATTCATGA
TGGTGTCGATCGACACCCAAGT
CCTGTCGATC
dot-bracket secondary structure
((((((((.((
..((((((((((((((((((..
...((.(((..(((((((.......(((((((......)))))))....)))))))...((....))
..))).))
))))))))))))))))))..))
..))))))))
SIMILARITIES
miRBase
ath-MIR855
:
0.0004
PMRD
ath-miRf10411-akr
:
1e-75
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10411-akr
from PMRD (
MNEST047511
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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