ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10138-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGACCTCTGGGTCGAGTGGT miRNA* CACTCGACCTCGGGGTCGAGT mismatches: 3 bulges: 0 |
pre-miRNA
ATGATGGCACTCGACCTCGGGGTCGAGTGGTGGTTGAATTGGTGATGTCCTCTACTCGACCTGTTGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTAC
TCGACCTCTGGGTCGAGTGGTTTGTCAT
dot-bracket secondary structure
((((..(((((((((((.((((((((((((..(((...(..(.(((.((..((((((((((....))))))))))......)).))))..))))..))))
)))))))).))))))))))..)..))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
ATGATGGCACTCGACCTCGGGGTCGAGTGGTGGTTGAATTGGTGATGTCCTCTACTCGACCTGTTGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTAC
TCGACCTCTGGGTCGAGTGGTTTGTCAT
dot-bracket secondary structure
((((..(((((((((((.((((((((((((..(((...(..(.(((.((..((((((((((....))))))))))......)).))))..))))..))))
)))))))).))))))))))..)..))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10772-akr: 1e-68 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10769-akr from PMRD (MNEST047869) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
