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ABOUT THIS RECORD
ID:
MNEST047245
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10145-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACTCGACCACCTGGTCGAGT
miRNA*
TCGACCCCCTGGTCGAGTAGAA
mismatches:
3
bulges:
1
View larger
pre-miRNA
GACCAC
TCGACCCCCTGGTCGAGTAGAA
GACTTCACTACTTCACTTCACCACTCGACCGCCTGGCCGAGTACCACCATGAGAGTCACTCGATCACTT
CAC
TCGACCACCTGGTCGAGT
ATC
dot-bracket secondary structure
....((
((((((...(((((((((.(((
(.....................(((((.((....)).))))).......((((.....))))....)))
)))
)))))))...))))))))
...
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf11062-akr
:
2e-64
microPC
no hits
UniProt
no hits
RFAM
MIR854: 0.000000002
Identical with:
ath-miRf11062-akr
from PMRD (
MNEST048162
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record