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ABOUT THIS RECORD
ID:
MNEST047303
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10203-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GGTCGAGTGGTTTGGCATGATCA
miRNA*
GTGATGTCCTCTACTCGACCTG
mismatches:
3
bulges:
1
View larger
pre-miRNA
GAAGTGAAGTG
GTGATGTCCTCTACTCGACCTG
GTGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTACTCGACCTCTG
GGTCGAGTGGTTTGGCATGA
TCA
GGTCCGCTTC
dot-bracket secondary structure
(((((((..((
((.(((((..((((((((((..
(.((((((((((...(((.((...)).)))...)))))))))).)..
))))))))))...))))).)
)))
..).))))))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10044-akr
:
6e-55
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10815-akr
from PMRD (
MNEST047915
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record