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ABOUT THIS RECORD
ID:
MNEST047308
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10208-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCGACCACAGGGTCGAGTG
miRNA*
CTCGATCCAGGTGGTCGAGTA
mismatches:
1
bulges:
1
View larger
pre-miRNA
CGGTA
CTCGATCCAGGTGGTCGAGTA
TCTAGTCGAGTGATTGAGATGGTGGTACTCGGCTTGGTGGTAGAGTGATCGAGTGAAGGTGATGTGGTGGAGGT
GATGATACTCGACCACATGGTCGAGTATTAACATCGAGTGGTTGTCTTGGTGGTA
CTCGACCACAGGGTCGAGTG
GTG
dot-bracket secondary structure
((.((
((((((((..(((((((((((
((...(((((((((((.((((.(((((((((((.........((....))...........(((((((.(((..
.......))).))))))).))))))))))).))))...)))))).))))).))))
))))))))).))))))))))
.))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10207-akr
:
3e-98
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10816-akr
from PMRD (
MNEST047916
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record