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ABOUT THIS RECORD

ID: MNEST047317
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10217-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTACTCGACCGCTGGGTCGAGTGGT

miRNA*
CACTCGACCTCGTGGTCGAGTGATG

mismatches: 3
bulges: 0

View larger
pre-miRNA
GGTGAAGACACTCGACCTCGTGGTCGAGTGATGTGATCGAGTGATGGTCAGGTGATGGAGATGAAGACGCTCGACCTCGTGGTCGAGTCGTGAGGTGAAG
TTGTGATGTCTTCTACTCGACCTGGGGGTCGAGTGGTCTCTTGAGATCTTGAAGCTCCTACTCGACCGCTGGGTCGAGTGGTTTTGTC


dot-bracket secondary structure
((..(((.((((((((((.(((((((((((........((((.....(((((...(.((((.((...(((((((((((..(((((((((....)..((((
.........)))).))))))))..))))))))))).)))))).)...))))).)))).))))))))))).)))))))))).)))..))



SIMILARITIES
miRBase no hits

PMRD ath-miRf10216-akr: 4e-76

microPC no hits
UniProt no hits

RFAM MIR854: 0.0002

Identical with: ath-miRf10819-akr from PMRD (MNEST047919)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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