ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10224-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTATGGTGTCGATCGACACTGGAG miRNA* CCAGTGTCGATCGACACTAGAGGG mismatches: 4 bulges: 0 |
pre-miRNA
ATCCAGATCCAGTGTCGATCGACACTAGAGGGGTATCGGTCGACACCGTCGTATTGAGTCGTCTCTGAGAAAAGGGTCCCGTATGGTGTCGATCGACACT
GGAGGGT
dot-bracket secondary structure
..((...((((((((((((((((((((..(((...(((((((((...)))).))))).....((((......)))).)))...)))))))))))))))))
))).)).
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
ATCCAGATCCAGTGTCGATCGACACTAGAGGGGTATCGGTCGACACCGTCGTATTGAGTCGTCTCTGAGAAAAGGGTCCCGTATGGTGTCGATCGACACT
GGAGGGT
dot-bracket secondary structure
..((...((((((((((((((((((((..(((...(((((((((...)))).))))).....((((......)))).)))...)))))))))))))))))
))).)).
SIMILARITIES| miRBase no hits PMRD ath-miRf10833-akr: 1e-49 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10833-akr from PMRD (MNEST047933) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
