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ABOUT THIS RECORD
ID:
MNEST047330
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10230-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGTTGGTGTCGCTCGACACCGAG
miRNA*
TGGTGTCGATCGACACCTCTGT
mismatches:
3
bulges:
1
View larger
pre-miRNA
GGGGT
TGGTGTCGATCGACACCTCTGT
TGTGTTGTTCGACACCAATCGCATCTGCGTTCTGGTCATGAAGGTGTCGATCGACACCC
AGTTGGTGTCGCTC
GACACCGAG
CCC
dot-bracket secondary structure
(((.(
(((((((((.(((((((.(((.
.((((((.((((((((...(((....))).((.......)).)))))))).)))))).)
))..))))))).))
)))))))).
)))
SIMILARITIES
miRBase
ath-MIR855
:
0.0003
PMRD
ath-miRf10454-akr
:
8e-36
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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