ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10245-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGTTGGCTTGAACGACGGCCAT miRNA* GGCCGTCGTAGACGCCAACAAA mismatches: 1 bulges: 2 |
pre-miRNA
CCGTGGCCGTCGTAGACGCCAACAAAGGTGCCAAAGGGACCAGAGTCGTGGGAGCTAAGAGAGCCAGACTCGAGCTGGCTCTGGTCCTCTAGCAAGCTGT
TGGCTTGAACGACGGCCATGG
dot-bracket secondary structure
(((((((((((((.((.(((((((....(((....((((((((((((.....((((....(((.....))).))))))))))))))))...)))...)))
))))))..)))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
CCGTGGCCGTCGTAGACGCCAACAAAGGTGCCAAAGGGACCAGAGTCGTGGGAGCTAAGAGAGCCAGACTCGAGCTGGCTCTGGTCCTCTAGCAAGCTGT
TGGCTTGAACGACGGCCATGG
dot-bracket secondary structure
(((((((((((((.((.(((((((....(((....((((((((((((.....((((....(((.....))).))))))))))))))))...)))...)))
))))))..)))))))))))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10562-akr: 4e-56 microPC no hits | UniProt sp|Q5PNS9|P2C64_ARATH: 0.000000000000002 RFAM no hits |
Identical with: ath-miRf10562-akr from PMRD (MNEST047662) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
