ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10256-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GCTATGTGTGCTCACTCTCT miRNA* AGAGTGAGCACACATGGTGG mismatches: 0 bulges: 0 |
pre-miRNA
GGTGACAGAAGAGAGTGAGCACACATGGTGGCTTTCTTGCATATTTGAAGGTTCCATGCTTGAAGCTATGTGTGCTCACTCTCTATCCGTCACC
dot-bracket secondary structure
((((((.((((((((((((((((((((((....(((..((((.............))))..))))))))))))))))))))))).)).))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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GGTGACAGAAGAGAGTGAGCACACATGGTGGCTTTCTTGCATATTTGAAGGTTCCATGCTTGAAGCTATGTGTGCTCACTCTCTATCCGTCACC
dot-bracket secondary structure
((((((.((((((((((((((((((((((....(((..((((.............))))..))))))))))))))))))))))).)).))))))
SIMILARITIES| miRBase ath-MIR156f: 2e-48 PMRD ath-miRf10257-akr: 2e-48 microPC miR156: 0.00000000000008 | UniProt no hits RFAM mir-156: 1e-43 |
Identical with: ath-MIR156f from miRBase (MNEST040007) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
