ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10260-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGGTGTCGATCGACACCAAC miRNA* CGGTGTCGATCGACACCTTCG mismatches: 4 bulges: 0 |
pre-miRNA
GGGCTCGGTGTCGATCGACACCTTCGGGAGCAGAACGCGGATGCAATCGGTATTGAATGACACAACAGAGGTGTCGATCGACACCAACACC
dot-bracket secondary structure
((....(((((((((((((((((..(...((.....)).(((((.....)))))...........)..)))))))))))))))))....))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GGGCTCGGTGTCGATCGACACCTTCGGGAGCAGAACGCGGATGCAATCGGTATTGAATGACACAACAGAGGTGTCGATCGACACCAACACC
dot-bracket secondary structure
((....(((((((((((((((((..(...((.....)).(((((.....)))))...........)..)))))))))))))))))....))
SIMILARITIES| miRBase no hits PMRD ath-miRf10834-akr: 6e-30 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
