ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10284-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATCTACTCGACCAGGGGGTCGAGT miRNA* TCGACCATATGATCGAGTAGAGAG mismatches: 5 bulges: 0 |
pre-miRNA
AAGGTACTCGACCATATGATCGAGTAGAGAGATCGAGTGATGTGGCCGAGTGATTGTCTTGGTGGTACTCGACCAGGGGGTCGAGTGATTTTGTGAAGTG
ATGAGGCCATCTACTCGACCAGGGGGTCGAGTGGTTT
dot-bracket secondary structure
(((.(((((((((...((.(((((((((...(((....)))..((((..((.(((.((.......(((((((((....))))))))).......))))).
))..)))).))))))))).))...))))))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
AAGGTACTCGACCATATGATCGAGTAGAGAGATCGAGTGATGTGGCCGAGTGATTGTCTTGGTGGTACTCGACCAGGGGGTCGAGTGATTTTGTGAAGTG
ATGAGGCCATCTACTCGACCAGGGGGTCGAGTGGTTT
dot-bracket secondary structure
(((.(((((((((...((.(((((((((...(((....)))..((((..((.(((.((.......(((((((((....))))))))).......))))).
))..)))).))))))))).))...))))))))).)))
SIMILARITIES| miRBase no hits PMRD ath-miRf10286-akr: 6e-74 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10285-akr from PMRD (MNEST047385) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
