ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10287-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTTCTCTCTCATTCCCGATCG miRNA* ATCGGGAATGAGAGAGAACAC mismatches: 0 bulges: 0 |
pre-miRNA
AACGATCGGGAATGAGAGAGAACACTGCAAATTAGAGATCCAAATTCAATGGATGGAGAGTAATCGATTCAGCTTGGATCGTAATTGGTAAGAGCATTGA
TAAGGGGTTAATTTGCAGTGTTCTCTCTCATTCCCGATCGTT
dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((...(((....((((.((((.((......)).)))).((((..((((....))))..)))).))))
...))).)))))))))))))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
AACGATCGGGAATGAGAGAGAACACTGCAAATTAGAGATCCAAATTCAATGGATGGAGAGTAATCGATTCAGCTTGGATCGTAATTGGTAAGAGCATTGA
TAAGGGGTTAATTTGCAGTGTTCTCTCTCATTCCCGATCGTT
dot-bracket secondary structure
(((((((((((((((((((((((((((((((((((...(((....((((.((((.((......)).)))).((((..((((....))))..)))).))))
...))).)))))))))))))))))))))))))))))))))))
SIMILARITIES| miRBase ath-MIR5029: 7e-77 PMRD ath-miRf10612-akr: 7e-77 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10612-akr from PMRD (MNEST047712) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
