ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10290-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GATACTCGACTTCCAGGTTGAGTG miRNA* CTCGGCCTGGGGGTCGAGTGATGT mismatches: 2 bulges: 0 |
pre-miRNA
GTCACTCGGCCTGGGGGTCGAGTGATGTGATCGAGTGGTGTCAGAAGATACTCGACTTCCAGGTTGAGTGAC
dot-bracket secondary structure
((((((((((((((((((((((((.(.((((........)))).)...))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GTCACTCGGCCTGGGGGTCGAGTGATGTGATCGAGTGGTGTCAGAAGATACTCGACTTCCAGGTTGAGTGAC
dot-bracket secondary structure
((((((((((((((((((((((((.(.((((........)))).)...))))))))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10291-akr: 2e-35 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10291-akr from PMRD (MNEST047391) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
