miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST047393
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10293-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CACTCGACCTGGGGGTCGAGTGAT
miRNA*
CACTCGGCCTGGGGGTCGAGTGAT
mismatches:
2
bulges:
0
View larger
pre-miRNA
GATGAAGT
CACTCGGCCTGGGGGTCGAGTGAT
GTGATCGAGTGGTGGTCAGAAGATGGAGATGAAGT
CACTCGACCTGGGGGTCGAGTGAT
GTGATC
dot-bracket secondary structure
(((.(.((
((((((((((..((((((((((((
.(.(((......(.(((....))).).))).).))
))))))))))..))))))))))))
.).)))
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10294-akr
:
3e-50
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10292-akr
from PMRD (
MNEST047392
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record