ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10297-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GTCACTCGACCTGGGGGTCGAGTGA miRNA* ACTCGACCTGGGGGTCGAGTGATGT mismatches: 2 bulges: 0 |
pre-miRNA
GATGAAGTTACTCGACCTGGGGGTCGAGTGATGTGATCGGGTGGTGGTCAGAAGATGGAGATGAAGTCACTCGACCTGGGGGTCGAGTGATGTGATC
dot-bracket secondary structure
(((.(.((((((((((((..((((((((((((.(.(((......(.(((....))).).))).).))))))))))))..)))))))))))).).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GATGAAGTTACTCGACCTGGGGGTCGAGTGATGTGATCGGGTGGTGGTCAGAAGATGGAGATGAAGTCACTCGACCTGGGGGTCGAGTGATGTGATC
dot-bracket secondary structure
(((.(.((((((((((((..((((((((((((.(.(((......(.(((....))).).))).).))))))))))))..)))))))))))).).)))
SIMILARITIES| miRBase no hits PMRD ath-miRf10298-akr: 3e-50 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10897-akr from PMRD (MNEST047997) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
