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ABOUT THIS RECORD
ID:
MNEST047406
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10306-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GTCACTTCCAGACCAGCGAG
miRNA*
CGTCTTGCGATGGAGGTGATTA
mismatches:
3
bulges:
2
View larger
pre-miRNA
GGCAGACTTCT
CGTCTTGCGATGGAGGTGATTA
ATCTCAAGTTCGTCGATACCTCATCGAAGGGGGGACATG
GTCACTTCCAGACCAGCGAG
GAAAAGGC
C
dot-bracket secondary structure
(((....((((
(((..((...((((((((((((
.((((...((((..((....))..))))...))))..))
))))))))))...)))))))
))....))
)
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
sp|P22738|RL32_ARATH: 0.0000002
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
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