ABOUT THIS RECORDspecies: Arabidopsis thaliana
miRNA family: MIRf206
source: PMRD, original name: ath-miRf10311-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCGCCGCCGTGTTCTGTCGA miRNA* GATGGGGCGCGGCGGCGCGTTC mismatches: 2 bulges: 1 |
pre-miRNA
GGCGGATGGGGCGCGGCGGCGCGTTCCTGTGACGCTTGTAAATCAGTTACCGCCGCCGTGTTCTGTCGAGTT
dot-bracket secondary structure
....(((((((((((((((((.((..(((..((....))....)))..))))))))))))))))))).....
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GGCGGATGGGGCGCGGCGGCGCGTTCCTGTGACGCTTGTAAATCAGTTACCGCCGCCGTGTTCTGTCGAGTT
dot-bracket secondary structure
....(((((((((((((((((.((..(((..((....))....)))..))))))))))))))))))).....
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q9FHH8|COL5_ARATH: 0.0000001 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
