ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10315-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACCTTTATATCCGCATTTGCG miRNA* CAAATGCGGATATCAATGTAA mismatches: 2 bulges: 0 |
pre-miRNA
GAAATGATGCGCAAATGCGGATATCAATGTAAATCAGGACAACAAACCAATAGAGGTGCTCAGCGAAAACAACAAAATGTGAAAAGGGTTTATCAGAAAC
ATTGGGGTCATGATATACCTTTATATCCGCATTTGCGCATCATCTC
dot-bracket secondary structure
((.(((((((((((((((((((((.((.(((.((((.(((..(((.......((...((((.......(((......))).....))))...))......
.)))..))).)))).))).)).))))))))))))))))))))).))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
GAAATGATGCGCAAATGCGGATATCAATGTAAATCAGGACAACAAACCAATAGAGGTGCTCAGCGAAAACAACAAAATGTGAAAAGGGTTTATCAGAAAC
ATTGGGGTCATGATATACCTTTATATCCGCATTTGCGCATCATCTC
dot-bracket secondary structure
((.(((((((((((((((((((((.((.(((.((((.(((..(((.......((...((((.......(((......))).....))))...))......
.)))..))).)))).))).)).))))))))))))))))))))).))
SIMILARITIES| miRBase ath-MIR2112: 3e-79 PMRD ath-miRf10913-akr: 3e-79 microPC no hits | UniProt no hits RFAM no hits |
Identical with: ath-miRf10913-akr from PMRD (MNEST048013) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
