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ABOUT THIS RECORD
ID:
MNEST047421
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10321-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTGGCTCTTCCGGGCGAA
miRNA*
CTTCTGGGCGAGCTGGCTGA
mismatches:
5
bulges:
0
View larger
pre-miRNA
AGCTGGCT
CTTCTGGGCGAGCTGGCTGA
TCTTCGACGAGCAGACTTCTCTCGACGAGCTGACTTGTATCGATGAGCTGGCTCTTCTGGGCGAGCTGGATG
ATCTTGACGAGCAGACTTCTCTCGACGAGCTGACTTGTATCGATG
AGCTGGCTCTTCCGGGCGAA
CTGGCT
dot-bracket secondary structure
(((..(.(
(.((((((.((((..(((.(
((....((((((((.(((.((..((.((((((.(((((((((.(.((((.((((....)))).)))).).))
))....)))))))).))).))..)).)))))).)))))...))).
)))..)))).)))))).)).
)..)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
degradome data
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