ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10322-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGCTGTCTGGAGATCGAGCTT miRNA* GCTCGACTAGGAGACAGTAGC mismatches: 2 bulges: 2 |
pre-miRNA
GCAATAAAAAAAGCTCGACTAGGAGACAGTAGCCAAGTAGAGCACTTCATCAACGAAGTGCTCATACTCTCTCAAATTAATCACATGAACGTAATCAAGA
TTTTGGGCTGCTGTCTGGAGATCGAGCTTTTTTTATTGC
dot-bracket secondary structure
((((((((((((((((((((...(((((((((((.(((((((((((((......))))))))).))))..........((((...(((......))).))
))...)))))))))))..)).))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GCAATAAAAAAAGCTCGACTAGGAGACAGTAGCCAAGTAGAGCACTTCATCAACGAAGTGCTCATACTCTCTCAAATTAATCACATGAACGTAATCAAGA
TTTTGGGCTGCTGTCTGGAGATCGAGCTTTTTTTATTGC
dot-bracket secondary structure
((((((((((((((((((((...(((((((((((.(((((((((((((......))))))))).))))..........((((...(((......))).))
))...)))))))))))..)).))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt sp|Q39191|WAK1_ARATH: 0.000000000000009 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
