ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10332-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ACTCGACCTGGGGGTCGAGT miRNA* TCGACCTCGGGGTCGAGTGG mismatches: 1 bulges: 0 |
pre-miRNA
ATGTAGACACTCGACCTCGGGGTCGAGTGGTGAGGTGAAGTGGTGGTGTCTTCTACTCGACCAGGGGGTCGAGTGGTCTGCTGAGGTTGTGAATCGTCTA
CTCGACCTGGGGGTCGAGTGGTTTTGCAT
dot-bracket secondary structure
((((((((((((((((((.((((((((((((((.(..(..(((..(......((((((((((....)))))))))).)..)))...)..)...))).)))
)))))))).)))))))))))..)))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
ATGTAGACACTCGACCTCGGGGTCGAGTGGTGAGGTGAAGTGGTGGTGTCTTCTACTCGACCAGGGGGTCGAGTGGTCTGCTGAGGTTGTGAATCGTCTA
CTCGACCTGGGGGTCGAGTGGTTTTGCAT
dot-bracket secondary structure
((((((((((((((((((.((((((((((((((.(..(..(((..(......((((((((((....)))))))))).)..)))...)..)...))).)))
)))))))).)))))))))))..)))))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10947-akr: 5e-62 microPC no hits | UniProt no hits RFAM MIR854: 0.0000001 |
Identical with: ath-miRf10946-akr from PMRD (MNEST048046) |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
