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ABOUT THIS RECORD

ID: MNEST047509
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10409-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GTTGGTGTCGCTCGACACCG

miRNA*
GTGTCGATCGACACCTCTG

mismatches: 2
bulges: 1

View larger
pre-miRNA
GGGGTTGGTGTCGATCGACACCTCTGTTGTGTCGCTCGACACCAATCGCGTCTACATTATGCTCCCAAAGGTGTCGATCGACACCCAGTTGGTGTCGCTC
GACACCG
AGCCC


dot-bracket secondary structure
(((.((((((((((.(((((((.(((..((((((.((((((((....((((.......)))).......)))))))).)))))).)))..))))))).))
)))))))
).)))



SIMILARITIES
miRBase ath-MIR855: 0.0003

PMRD ath-miRf10230-akr: 3e-35

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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