miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST047523
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10423-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCGATGGTGTCGATCGACAC
miRNA*
GTCGGTCGACACTATCAATG
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGGT
GTCGGTCGACACTATCAATG
TGTGTCGAGCGATTTTGGAGATCAATGTCGAGCTTGCTCGATTCTGCTTCGTCACAGCCTGATGTCTCGTATATA
T
GCGATGGTGTCGATCGACAC
CA
dot-bracket secondary structure
.(((
((((((((((((((((.(((
((((.(((((......((((......((((((....))))))....)))).(((.....))).).))))))))))
)
..))))))))))))))))))
).
SIMILARITIES
miRBase
no hits
PMRD
ath-miRf10493-akr
:
2e-49
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record