ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10427-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAACGACGTCGTTTCGTTCT miRNA* AACCAAACGACGTTGTTTTA mismatches: 2 bulges: 0 |
pre-miRNA
AGTTTCCGTTGAACCAAACGACGTTGTTTTAAATTCACTAAGAAAAAAAATTAAGTACTTTAGGGAATCAAACAATTATTTTTTTTAGTGAATTCAAAAC
GACGTCGTTTCGTTCTACGAAGACT
dot-bracket secondary structure
(((((.(((.((((.(((((((((((((((.((((((((((((((((.((((.....................)))).)))))))))))))))).)))))
)))))))))).)))).))).)))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
download this record
AGTTTCCGTTGAACCAAACGACGTTGTTTTAAATTCACTAAGAAAAAAAATTAAGTACTTTAGGGAATCAAACAATTATTTTTTTTAGTGAATTCAAAAC
GACGTCGTTTCGTTCTACGAAGACT
dot-bracket secondary structure
(((((.(((.((((.(((((((((((((((.((((((((((((((((.((((.....................)))).)))))))))))))))).)))))
)))))))))).)))).))).)))))
SIMILARITIES| miRBase no hits PMRD ath-miRf10446-akr: 0.0004 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
download this record
