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ABOUT THIS RECORD

ID: MNEST047527
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10427-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAACGACGTCGTTTCGTTCT

miRNA*
AACCAAACGACGTTGTTTTA

mismatches: 2
bulges: 0

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pre-miRNA
AGTTTCCGTTGAACCAAACGACGTTGTTTTAAATTCACTAAGAAAAAAAATTAAGTACTTTAGGGAATCAAACAATTATTTTTTTTAGTGAATTCAAAAC
GACGTCGTTTCGTTCT
ACGAAGACT


dot-bracket secondary structure
(((((.(((.((((.(((((((((((((((.((((((((((((((((.((((.....................)))).)))))))))))))))).)))))
)))))))))).)))).
))).)))))



SIMILARITIES
miRBase no hits

PMRD ath-miRf10446-akr: 0.0004

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
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