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ABOUT THIS RECORD
ID:
MNEST047528
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10428-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGACGGCTGGGAAATGGCA
miRNA*
AAATATCCTTGGCCGTCCTGG
mismatches:
5
bulges:
1
View larger
pre-miRNA
GGGCTTGGG
AAATATCCTTGGCCGTCCTGG
TACTGGAGGAATGATGCCCGGCATGCCGGGAACTAGGGTGATGCCTATGGATG
AAGACGGCTGGGAAATG
GCA
CGGACCC
dot-bracket secondary structure
(((..((.(
..((.((((.(((((((.(.(
(.(((.(((.((.((.(((((....))))).......)).)).))).))))).
).))))))))))).)).
.).
))..)))
SIMILARITIES
miRBase
no hits
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
not a miRNA
additional data
degradome data
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