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ABOUT THIS RECORD
ID:
MNEST047529
species:
Arabidopsis thaliana
source:
PMRD, original name:
ath-miRf10429-akr
Taxonomy by NCBI:
Arabidopsis thaliana
Arabidopsis
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGAAGGACCTGAAGCTATGCT
miRNA*
CATAGCTCCATATCCTTCAATG
mismatches:
3
bulges:
0
View larger
pre-miRNA
TGACACGGAAG
CATAGCTCCATATCCTTCAATG
GAGGTGTGGTCCTTCAACAAAAATACCCCCCTCTTGAAACTCTGTTTCACCACACCTCCA
TTGAAGG
ACCTGAAGCTATGCT
TCCTTGTCA
dot-bracket secondary structure
.((((.(((((
(((((((.((..((((((((((
((((((((((.........................(((((...)))))))))))))))))
)))))))
)..)).)))))))))
))).)))).
SIMILARITIES
miRBase
ath-MIR836
:
3e-66
PMRD
ath-miRf10744-akr
:
3e-66
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ath-miRf10744-akr
from PMRD (
MNEST047844
)
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record