ABOUT THIS RECORDspecies: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10433-akr
Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AACGTTGCCGCAGCCGCTGT miRNA* AGCGGCTGCGGTTGCGGCAG mismatches: 3 bulges: 0 |
pre-miRNA
GCGGCAGCGGCTGCGGTTGCGGCAGCGGCAACGGTAACACTGCCGCAGGTTGTTGTTCGTTTCGTCGCCGCCAACGTTGCCGCAGCCGCTGTCGC
dot-bracket secondary structure
(((((((((((((((((.(((...(((((.((((.(((((.(((...))).).))))....)))).)))))...))).)))))))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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GCGGCAGCGGCTGCGGTTGCGGCAGCGGCAACGGTAACACTGCCGCAGGTTGTTGTTCGTTTCGTCGCCGCCAACGTTGCCGCAGCCGCTGTCGC
dot-bracket secondary structure
(((((((((((((((((.(((...(((((.((((.(((((.(((...))).).))))....)))).)))))...))).)))))))))))))))))
SIMILARITIES| miRBase ath-MIR404: 0.0000000000003 PMRD ath-miRf10110-akr: 5e-43 microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
