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ABOUT THIS RECORD

ID: MNEST047540
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10440-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTCTCCAACATGGAGATTC

miRNA*
GCTCATGTTGGAGAAGTT

mismatches: 0
bulges: 2

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pre-miRNA
GGGTGAAGAGCTCATGTTGGAGAAGTTAAGTACGTGCAAATAAGCAAATGAGACGGATTTCGTGTTTGTTGGTTTGCACGTGCCCTGCTTCTCCAACATG
GAGATTC
TCACCC


dot-bracket secondary structure
((((((.(((((((((((((((((((...((((((((((((.(((((((...(((.....)))))))))).))))))))))))...))))))))))))).
))).)))
))))))



SIMILARITIES
miRBase ath-MIR164a: 1e-59

PMRD ath-miRf10439-akr: 1e-59

microPC miR164: 0.00002
UniProt no hits

RFAM MIR164: 2e-49

Identical with: ath-miRf10439-akr from PMRD (MNEST047539)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
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