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ABOUT THIS RECORD

ID: MNEST047541
species: Arabidopsis thaliana
source: PMRD, original name: ath-miRf10441-akr

Taxonomy by NCBI:
Arabidopsis thaliana Arabidopsis Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AAGCACATCCTCTTGCTTCC

miRNA*
AAGCAAGATGATGTGCTTAC

mismatches: 1
bulges: 0

View larger
pre-miRNA
CTTGTGGAGGAAGCAAGATGATGTGCTTACTTGTGGAATTTTTGTTATGTGAGTGAATACGATGAATATATTTTAAGGGCCCTATATTTCCACAACCAAG
CACATCCTCTTGCTTCC
TCTCCACAAG


dot-bracket secondary structure
((((((((((((((((((.(((((((((..((((((((..((..(..(((......)))..)..)).........((....))....))))))))..)))
)))))).))))))))))
..))))))))



SIMILARITIES
miRBase no hits

PMRD ath-miRf11045-akr: 5e-68

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ath-miRf11045-akr from PMRD (MNEST048145)

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
degradome data
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